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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS17025.1PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: azo:azo1128 ABC transporter ATP-binding protein. (243 aa)    
Predicted Functional Partners:
ACS17027.1
PFAM: inner-membrane translocator; KEGG: bpt:Bpet3756 branched chain amino acid ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.
  
 0.965
ACS17028.1
PFAM: inner-membrane translocator; KEGG: azo:azo1125 ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.957
ACS17029.1
PFAM: Extracellular ligand-binding receptor; KEGG: bpt:Bpet0544 putative ABC transporter substrate binding protein.
 
  
 0.948
ACS17026.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: azo:azo1127 ABC transporter ATP-binding protein.
 
  
0.891
ACS17296.1
PFAM: inner-membrane translocator; KEGG: azo:azo1126 putative branched-chain amino acid transport permease; Belongs to the binding-protein-dependent transport system permease family.
  
 0.849
ACS16748.1
PFAM: inner-membrane translocator; KEGG: dac:Daci_0079 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
  
 0.844
ACS17297.1
PFAM: inner-membrane translocator; KEGG: azo:azo1125 ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.815
ACS16749.1
PFAM: inner-membrane translocator; KEGG: dac:Daci_0078 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.803
ACS18234.1
PFAM: inner-membrane translocator; KEGG: dac:Daci_6025 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
  
 0.792
ACS21981.1
PFAM: Extracellular ligand-binding receptor; KEGG: bav:BAV3033 ABC transporter, substrate-binding protein.
 
  
 0.782
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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