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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS17091.1Transcriptional regulator, GntR family; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: pol:Bpro_1052 transcriptional regulator, GntR family. (255 aa)    
Predicted Functional Partners:
ACS18761.1
Transcriptional regulator, GntR family; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: rfr:Rfer_2806 GntR family transcriptional regulator.
  
     0.768
ACS16939.1
Transcriptional regulator, GntR family; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: vei:Veis_0841 GntR family transcriptional regulator.
  
     0.764
ACS22132.1
PFAM: regulatory protein GntR HTH; GntR domain protein; SMART: regulatory protein GntR HTH; KEGG: bph:Bphy_4435 GntR domain-containing protein.
  
  
 0.753
ACS22621.1
Transcriptional regulator, GntR family; PFAM: GntR domain protein; regulatory protein GntR HTH; KEGG: mes:Meso_2357 transcriptional regulator, GntR family.
  
     0.751
ACS20304.1
PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: pol:Bpro_3530 transcriptional regulator, GntR family.
  
  
 0.748
ACS22190.1
PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: swi:Swit_1150 GntR family transcriptional regulator.
  
  
 0.746
ACS17993.1
PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: rec:RHECIAT_CH0000377 probable transcriptional regulator protein, GntR family.
  
  
 0.730
ACS17092.1
PFAM: polysaccharide deacetylase; KEGG: vei:Veis_3554 hypothetical protein.
 
    0.690
ACS21918.1
PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: pna:Pnap_2075 GntR domain-containing protein.
  
  
 0.678
ACS17440.1
PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: vei:Veis_1542 GntR domain-containing protein.
  
  
 0.670
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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