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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS17092.1PFAM: polysaccharide deacetylase; KEGG: vei:Veis_3554 hypothetical protein. (307 aa)    
Predicted Functional Partners:
ACS17093.1
KEGG: rpb:RPB_2080 hypothetical protein.
 
     0.827
ACS17091.1
Transcriptional regulator, GntR family; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: pol:Bpro_1052 transcriptional regulator, GntR family.
 
    0.690
ACS20880.1
KEGG: bpl:BURPS1106A_A0996 glycosyl transferase, group 2 family protein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: glycosyl transferase family 2; outer membrane efflux protein.
  
  
 0.666
ACS20561.1
PFAM: glycosyl transferase family 2; KEGG: bar:GBAA3480 glycosyl transferase, group 2 family protein/polysaccharide deacetylase family protein.
  
  
 0.646
ACS17427.1
PFAM: glycosyl transferase family 2; Methyltransferase type 11; glycosyl transferase group 1; KEGG: gbe:GbCGDNIH1_0743 glycosyltransferase.
  
  
 0.532
ACS20026.1
KEGG: bbt:BBta_3190 hypothetical protein.
 
     0.524
gshB
KEGG: mpt:Mpe_A0180 glutathione synthetase; TIGRFAM: glutathione synthetase; PFAM: glutathione synthetase ATP-binding; RimK domain protein ATP-grasp; glutathione synthetase domain protein; Belongs to the prokaryotic GSH synthase family.
       0.522
ACS17094.1
TIGRFAM: benzoate transporter; PFAM: Benzoate membrane transport protein; Xanthine/uracil/vitamin C permease; KEGG: dia:Dtpsy_3257 benzoate transporter.
       0.508
ACS20889.1
PFAM: Asp/Glu/hydantoin racemase; KEGG: pol:Bpro_0552 Asp/Glu racemase.
 
     0.504
ACS20550.1
PFAM: Asp/Glu/hydantoin racemase; KEGG: aav:Aave_1097 Asp/Glu racemase.
 
     0.503
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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