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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS17098.1PFAM: glutamine amidotransferase class-II; KEGG: ajs:Ajs_0335 glutamine amidotransferase, class-II. (255 aa)    
Predicted Functional Partners:
ACS20276.1
TIGRFAM: methyltransferase; KEGG: mpt:Mpe_A1380 hypothetical protein.
  
  
 0.808
ACS17099.1
PFAM: Extracellular ligand-binding receptor; KEGG: lch:Lcho_1126 extracellular ligand-binding receptor.
       0.618
ACS17097.1
TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: dia:Dtpsy_2068 TonB-dependent siderophore receptor.
       0.496
ACS17100.1
TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: pol:Bpro_4538 major facilitator superfamily MFS_1.
       0.493
ACS17096.1
PFAM: PepSY-associated TM helix domain protein; KEGG: dac:Daci_2267 PepSY-associated TM helix domain-containing protein.
       0.486
ACS17235.1
KEGG: pol:Bpro_4459 putative lipoprotein transmembrane.
  
  
 0.430
ACS18226.1
PFAM: protein of unknown function DUF323; KEGG: pna:Pnap_1506 hypothetical protein.
  
  
 0.423
ACS18698.1
PFAM: protein of unknown function DUF323; KEGG: lch:Lcho_1725 hypothetical protein.
  
  
 0.423
ACS20277.1
PFAM: protein of unknown function DUF323; KEGG: bam:Bamb_0015 hypothetical protein.
  
  
 0.423
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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