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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS17114.1PFAM: protein of unknown function DUF1016; KEGG: hap:HAPS_1837 putative cytoplasmic protein. (375 aa)    
Predicted Functional Partners:
ACS17113.1
PFAM: major facilitator superfamily MFS_1; KEGG: ajs:Ajs_1147 major facilitator superfamily transporter.
       0.478
ACS19241.1
KEGG: cbs:COXBURSA331_A1986 hypothetical protein.
 
     0.450
ACS22174.1
KEGG: pol:Bpro_2513 hypothetical protein.
  
     0.421
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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