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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS17121.1KEGG: aav:Aave_0412 putative transmembrane protein. (150 aa)    
Predicted Functional Partners:
ACS17122.1
KEGG: sus:Acid_0041 integral membrane protein-like protein.
       0.773
ACS17120.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: dia:Dtpsy_0328 transcriptional regulator, LysR family.
       0.620
ACS18788.1
PFAM: protein of unknown function DUF883 ElaB; KEGG: dia:Dtpsy_1647 protein of unknown function DUF883 ElaB.
  
     0.528
ACS17953.1
Procollagen-proline dioxygenase; KEGG: ajs:Ajs_3293 2OG-Fe(II) oxygenase; PFAM: 2OG-Fe(II) oxygenase; SMART: Prolyl 4-hydroxylase alpha subunit.
 
     0.500
ACS18867.1
KEGG: eba:ebA2554 hypothetical protein.
  
     0.497
ACS21714.1
KEGG: dac:Daci_0832 putative lipoprotein transmembrane.
  
     0.496
ACS17118.1
PFAM: pyruvate carboxyltransferase; KEGG: pol:Bpro_4514 hydroxymethylglutaryl-CoA lyase.
       0.481
ACS17119.1
PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: pol:Bpro_4514 hydroxymethylglutaryl-CoA lyase; Belongs to the CoA-transferase III family.
       0.481
ACS20201.1
KEGG: bxe:Bxe_B0348 procollagen-proline,2-oxoglutarate-4-dioxygenase; PFAM: 2OG-Fe(II) oxygenase; SMART: Prolyl 4-hydroxylase alpha subunit.
  
     0.471
ACS20951.1
KEGG: pol:Bpro_1298 hypothetical protein.
  
     0.457
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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