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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS17137.1KEGG: pol:Bpro_4483 protein of unknown function DUF132. (143 aa)    
Predicted Functional Partners:
ACS17136.1
PFAM: putative RNA methylase; THUMP domain protein; KEGG: aav:Aave_0422 putative RNA methylase; Belongs to the methyltransferase superfamily.
       0.765
ACS21874.1
PFAM: Barstar (barnase inhibitor); KEGG: dia:Dtpsy_3467 barstar (barnase inhibitor).
  
     0.762
ACS21390.1
KEGG: dia:Dtpsy_0437 hypothetical protein.
  
     0.753
ACS21369.1
PFAM: GCN5-related N-acetyltransferase; KEGG: pol:Bpro_4211 GCN5-related N-acetyltransferase.
  
     0.741
ACS18281.1
KEGG: ajs:Ajs_1187 putative transmembrane protein.
  
     0.733
ACS18190.1
KEGG: aav:Aave_1927 hypothetical protein.
  
     0.727
ACS18946.1
KEGG: rfr:Rfer_2901 putative inner membrane transmembrane protein.
  
     0.719
ACS21711.1
PFAM: branched-chain amino acid transport; KEGG: pol:Bpro_4636 branched-chain amino acid transport.
  
     0.701
ACS19718.1
PFAM: Lytic transglycosylase catalytic; KEGG: aav:Aave_2991 lytic transglycosylase, catalytic.
  
     0.693
ACS21389.1
KEGG: pol:Bpro_0444 hypothetical protein.
  
     0.648
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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