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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS17149.1KEGG: psp:PSPPH_2654 putative lipoprotein. (249 aa)    
Predicted Functional Partners:
ACS17148.1
PFAM: major facilitator superfamily MFS_1; KEGG: mms:mma_1590 major facilitator transporter.
       0.757
ACS19901.1
PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; KEGG: dac:Daci_0931 phosphoesterase PA-phosphatase related.
  
     0.684
ACS17584.1
KEGG: dac:Daci_2221 hypothetical protein.
  
     0.680
ACS17776.1
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: bbr:BB0832 TonB-dependent receptor.
  
     0.633
ACS20467.1
TIGRFAM: outer membrane autotransporter barrel domain protein; autotransporter-associated beta strand repeat protein; PFAM: Autotransporter beta- domain protein; Pertactin; KEGG: rme:Rmet_0614 outer membrane autotransporter barrel.
  
     0.613
ACS17521.1
PFAM: protein of unknown function DUF1656; KEGG: bav:BAV2023 component of multidrug efflux system.
  
     0.598
ACS17975.1
KEGG: ypi:YpsIP31758_4012 hypothetical protein.
  
     0.598
ACS18309.1
KEGG: mpt:Mpe_A0046 hypothetical protein.
  
     0.569
ACS20752.1
PFAM: MscS Mechanosensitive ion channel; KEGG: aav:Aave_3656 MscS mechanosensitive ion channel.
  
     0.557
ACS21207.1
TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; KEGG: ppf:Pput_0829 TolC family type I secretion outer membrane protein.
  
     0.546
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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