close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS17153.1Glutamate--cysteine ligase GCS2; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily. (394 aa)    
Predicted Functional Partners:
ACS17154.1
PFAM: sodium/hydrogen exchanger; KEGG: aav:Aave_0435 sodium/hydrogen exchanger.
 
     0.955
gshB
KEGG: mpt:Mpe_A0180 glutathione synthetase; TIGRFAM: glutathione synthetase; PFAM: glutathione synthetase ATP-binding; RimK domain protein ATP-grasp; glutathione synthetase domain protein; Belongs to the prokaryotic GSH synthase family.
    
 0.926
ACS17089.1
TIGRFAM: glutamate/cysteine ligase; PFAM: glutamate--cysteine ligase GshA; KEGG: dia:Dtpsy_3259 glutamate/cysteine ligase.
  
  
  0.921
gshA
KEGG: pol:Bpro_3399 glutamate-cysteine ligase; TIGRFAM: glutamate/cysteine ligase; PFAM: glutamate--cysteine ligase; Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily.
     
 0.916
ACS17905.1
Gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase; KEGG: pol:Bpro_3878 Gamma-glutamyltransferase 2. Threonine peptidase. MEROPS family T03.
    
 0.914
ACS18276.1
Gamma-glutamyltransferase; KEGG: rso:RSp0274 gamma-glutamyltranspeptidase signal peptide protein; TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase.
    
 0.914
ACS18291.1
KEGG: vei:Veis_4194 gamma-glutamyltransferase; TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase.
    
 0.914
ACS18432.1
Gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase; KEGG: aav:Aave_3307 gamma-glutamyltransferase 1.
    
 0.914
ACS19774.1
PFAM: Peptidase M1 membrane alanine aminopeptidase; KEGG: rpi:Rpic_4680 peptidase M1 membrane alanine aminopeptidase.
     
 0.902
ACS20408.1
TIGRFAM: aminopeptidase N; PFAM: Peptidase M1 membrane alanine aminopeptidase; KEGG: pol:Bpro_1587 peptidase M1, alanyl aminopeptidase.
     
 0.902
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.