STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS17154.1PFAM: sodium/hydrogen exchanger; KEGG: aav:Aave_0435 sodium/hydrogen exchanger. (423 aa)    
Predicted Functional Partners:
ACS17153.1
Glutamate--cysteine ligase GCS2; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily.
 
     0.955
ACS17155.1
KEGG: dia:Dtpsy_0348 putative site-specific recombinase transmembrane protein.
 
     0.837
ACS20702.1
KEGG: pna:Pnap_0959 putative lipoprotein.
  
     0.723
ACS18992.1
KEGG: ajs:Ajs_1766 putative transmembrane protein.
 
     0.713
ACS18951.1
KEGG: ajs:Ajs_2356 exonuclease-like protein.
 
     0.710
ACS18115.1
KEGG: dia:Dtpsy_2422 hypothetical protein.
 
    0.681
ACS21810.1
PFAM: peptidase C26; glutamine amidotransferase class-I; KEGG: aav:Aave_4597 peptidase C26.
 
     0.675
ACS21389.1
KEGG: pol:Bpro_0444 hypothetical protein.
  
     0.666
ACS21714.1
KEGG: dac:Daci_0832 putative lipoprotein transmembrane.
  
     0.665
ACS18122.1
KEGG: rfr:Rfer_1400 hypothetical protein.
 
     0.663
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.