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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS17165.1SMART: Tetratricopeptide domain protein; KEGG: lch:Lcho_4095 TPR repeat-containing protein. (717 aa)    
Predicted Functional Partners:
ACS17167.1
TIGRFAM: filamentous haemagglutinin family outer membrane protein; PFAM: filamentous haemagglutinin domain protein; KEGG: mgm:Mmc1_2695 filamentous haemagglutinin family outer membrane protein.
 
     0.762
ACS17217.1
Hypothetical protein; KEGG: eba:ebA1686 serine/threonine protein kinase.
  
     0.703
ACS17166.1
PFAM: Polypeptide-transport-associated domain protein ShlB-type; surface antigen variable number repeat protein; KEGG: cak:Caul_4107 polypeptide-transport-associated domain-containing protein.
 
     0.685
ACS16920.1
PFAM: O-antigen polymerase; KEGG: har:HEAR0457 hypothetical protein.
 
     0.643
ACS17186.1
PFAM: peptidase C14 caspase catalytic subunit p20; KEGG: mlo:mlr3300 hypothetical protein.
 
     0.625
ACS22531.1
TIGRFAM: outer membrane adhesin like proteiin; PFAM: Hemolysin-type calcium-binding region; KEGG: dar:Daro_3199 VCBS.
  
     0.614
ACS17638.1
Trehalose-phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
   
    0.613
ACS21916.1
Putative membrane protein involved in toxin uptake; KEGG: dac:Daci_2082 hypothetical protein.
  
     0.582
ACS21383.1
KEGG: sbn:Sbal195_2514 hypothetical protein.
  
     0.575
ACS16835.1
KEGG: cja:CJA_0124 hypothetical protein.
  
     0.567
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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