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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS17192.1PFAM: Methyltransferase type 11; TPR repeat-containing protein; Methyltransferase type 12; SMART: Tetratricopeptide domain protein; KEGG: lch:Lcho_4081 methyltransferase type 12. (444 aa)    
Predicted Functional Partners:
ACS17188.1
PFAM: virulence protein SciE type; KEGG: azo:azo3899 putative cytoplasmic protein,SciE.
 
     0.828
ACS17191.1
TIGRFAM: type VI secretion protein, VC_A0111 family; PFAM: protein of unknown function DUF1305; KEGG: azo:azo3902 putative cytoplasmic protein, SciB.
 
     0.817
ACS17190.1
TIGRFAM: type VI secretion protein, VC_A0110 family; PFAM: protein of unknown function DUF879; KEGG: azo:azo3901 putative cytoplasmic protein, SciC.
 
     0.814
ACS17189.1
TIGRFAM: type VI secretion system lysozyme-related protein; PFAM: GPW/gp25 family protein; KEGG: lch:Lcho_4087 type VI secretion system lysozyme-related protein.
       0.787
ACS17187.1
Hypothetical protein.
       0.780
ACS17186.1
PFAM: peptidase C14 caspase catalytic subunit p20; KEGG: mlo:mlr3300 hypothetical protein.
       0.684
ACS17193.1
Type VI secretion ATPase, ClpV1 family; KEGG: azo:azo3903 putative ATP-dependent Clp protease, ATP-binding subunit ClpB; TIGRFAM: type VI secretion ATPase, ClpV1 family; PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; Clp domain protein; SMART: AAA ATPase; Belongs to the ClpA/ClpB family.
       0.595
ACS17196.1
PFAM: pentapeptide repeat protein; KEGG: bbr:BB0796 hypothetical protein.
 
  
 0.586
ACS17195.1
PFAM: pentapeptide repeat protein; KEGG: scl:sce4933 hypothetical protein.
  
  
 0.570
ACS20021.1
TIGRFAM: DNA internalization-related competence protein ComEC/Rec2; ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein; beta-lactamase domain protein; KEGG: rfr:Rfer_2476 DNA internalization-related competence protein ComEC/Rec2.
 
  
 0.553
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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