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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS17203.1KEGG: pau:PA14_01200 hypothetical protein. (389 aa)    
Predicted Functional Partners:
ACS17202.1
KEGG: pae:PA0098 3-oxoacyl-(acyl carrier protein) synthase.
 
  
 0.979
ACS17201.1
KEGG: pfl:PFL_3002 hypothetical protein.
 
  
 0.963
ACS17200.1
KEGG: pmy:Pmen_2333 hypothetical protein.
 
  
 0.953
ACS17205.1
KEGG: pau:PA14_01230 hypothetical protein.
 
  
 0.920
ACS17199.1
TIGRFAM: type VI secretion system Vgr family protein; Rhs element Vgr protein; PFAM: Rhs element Vgr protein; Gp5 domain protein; KEGG: pfl:PFL_3004 rhs-family protein.
 
  
 0.912
ACS17194.1
TIGRFAM: type VI secretion system Vgr family protein; Rhs element Vgr protein; PFAM: Rhs element Vgr protein; KEGG: pae:PA0095 hypothetical protein.
 
  
 0.807
ACS20473.1
TIGRFAM: type VI secretion system Vgr family protein; Rhs element Vgr protein; PFAM: Rhs element Vgr protein; KEGG: aav:Aave_3347 rhs element Vgr protein.
 
  
 0.770
ACS22271.1
TIGRFAM: type VI secretion system Vgr family protein; Rhs element Vgr protein; PFAM: Rhs element Vgr protein; KEGG: reh:H16_B2108 two domain protein: VgrG and COG4253.
 
  
 0.769
ACS17191.1
TIGRFAM: type VI secretion protein, VC_A0111 family; PFAM: protein of unknown function DUF1305; KEGG: azo:azo3902 putative cytoplasmic protein, SciB.
 
    0.763
ACS17190.1
TIGRFAM: type VI secretion protein, VC_A0110 family; PFAM: protein of unknown function DUF879; KEGG: azo:azo3901 putative cytoplasmic protein, SciC.
 
    0.760
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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