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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS17235.1KEGG: pol:Bpro_4459 putative lipoprotein transmembrane. (200 aa)    
Predicted Functional Partners:
ACS18052.1
KEGG: pol:Bpro_3636 putative transmembrane protein.
  
    0.606
ACS18792.1
PFAM: glutaredoxin; KEGG: aav:Aave_2457 glutaredoxin.
 
     0.598
ACS21229.1
PFAM: CheW domain protein; KEGG: pol:Bpro_1138 CheW-like protein.
  
     0.592
ACS20276.1
TIGRFAM: methyltransferase; KEGG: mpt:Mpe_A1380 hypothetical protein.
  
  
 0.579
ACS19382.1
KEGG: pna:Pnap_2002 hypothetical protein.
  
     0.570
ACS21790.1
FHA domain containing protein; PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein; KEGG: rfr:Rfer_3940 FHA domain-containing protein.
  
    0.569
ACS18226.1
PFAM: protein of unknown function DUF323; KEGG: pna:Pnap_1506 hypothetical protein.
 
  
 0.546
ACS21227.1
CheA signal transduction histidine kinase; PFAM: response regulator receiver; Hpt domain protein; Signal transducing histidine kinase homodimeric; CheW domain protein; ATP-binding region ATPase domain protein; SMART: response regulator receiver; Hpt domain protein; CheW domain protein; ATP-binding region ATPase domain protein; KEGG: pol:Bpro_1140 CheA signal transduction histidine kinases.
  
     0.525
ACS21926.1
KEGG: Os03g0103300; hypothetical protein.
 
    0.494
ACS17558.1
KEGG: pol:Bpro_1065 hypothetical protein.
  
     0.490
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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