ACS17254.1 protein (Variovorax paradoxus S110)

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ACS17254.1

Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. (442 aa)

Predicted Functional Partners:

fmt

0.899

ACS20246.1

0.893

rplJ

0.888

ACS17256.1

0.886

ACS17255.1

0.880

rlmE

0.871

rplW

0.801

rpmD

0.791

pheT

0.763

rplX

0.761

Your Current Organism:

Variovorax paradoxus S110

NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACS17254.1	ACS17255.1	Vapar_0591	Vapar_0592	Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.	KEGG: aav:Aave_4527 putative proline rich signal peptide protein.	0.880
ACS17254.1	ACS17256.1	Vapar_0591	Vapar_0593	Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.	PAS/PAC sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; histidine kinase HAMP region domain protein; KEGG: ajs:Ajs_3892 multi-sensor signal transduction histidine kinase.	0.886
ACS17254.1	ACS20246.1	Vapar_0591	Vapar_3629	Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.	GTP-binding protein HSR1-related; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.	0.893
ACS17254.1	fmt	Vapar_0591	Vapar_5111	Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.	methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.	0.899
ACS17254.1	pheT	Vapar_0591	Vapar_1875	Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.	TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit; KEGG: ajs:Ajs_2395 phenylalanyl-tRNA synthetase subunit beta; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.	0.763
ACS17254.1	rlmE	Vapar_0591	Vapar_2623	Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.	Ribosomal RNA methyltransferase RrmJ/FtsJ; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit.	0.871
ACS17254.1	rplJ	Vapar_0591	Vapar_0586	Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.	Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	0.888
ACS17254.1	rplW	Vapar_0591	Vapar_4911	Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.	Ribosomal protein L25/L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.	0.801
ACS17254.1	rplX	Vapar_0591	Vapar_5059	Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.	Ribosomal protein L24; One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	0.761
ACS17254.1	rpmD	Vapar_0591	Vapar_5052	Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.	TIGRFAM: ribosomal protein L30; PFAM: ribosomal protein L30; KEGG: dac:Daci_1040 ribosomal protein L30.	0.791
ACS17255.1	ACS17254.1	Vapar_0592	Vapar_0591	KEGG: aav:Aave_4527 putative proline rich signal peptide protein.	Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.	0.880
ACS17255.1	ACS17256.1	Vapar_0592	Vapar_0593	KEGG: aav:Aave_4527 putative proline rich signal peptide protein.	PAS/PAC sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; histidine kinase HAMP region domain protein; KEGG: ajs:Ajs_3892 multi-sensor signal transduction histidine kinase.	0.952
ACS17256.1	ACS17254.1	Vapar_0593	Vapar_0591	PAS/PAC sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; histidine kinase HAMP region domain protein; KEGG: ajs:Ajs_3892 multi-sensor signal transduction histidine kinase.	Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.	0.886
ACS17256.1	ACS17255.1	Vapar_0593	Vapar_0592	PAS/PAC sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; histidine kinase HAMP region domain protein; KEGG: ajs:Ajs_3892 multi-sensor signal transduction histidine kinase.	KEGG: aav:Aave_4527 putative proline rich signal peptide protein.	0.952
ACS20246.1	ACS17254.1	Vapar_3629	Vapar_0591	GTP-binding protein HSR1-related; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.	Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.	0.893
ACS20246.1	fmt	Vapar_3629	Vapar_5111	GTP-binding protein HSR1-related; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.	methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.	0.412
ACS20246.1	rlmE	Vapar_3629	Vapar_2623	GTP-binding protein HSR1-related; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.	Ribosomal RNA methyltransferase RrmJ/FtsJ; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit.	0.909
ACS20246.1	rplJ	Vapar_3629	Vapar_0586	GTP-binding protein HSR1-related; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.	Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	0.924
ACS20246.1	rplW	Vapar_3629	Vapar_4911	GTP-binding protein HSR1-related; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.	Ribosomal protein L25/L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.	0.857
ACS20246.1	rplX	Vapar_3629	Vapar_5059	GTP-binding protein HSR1-related; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.	Ribosomal protein L24; One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	0.842