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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS17278.15-carboxymethyl-2-hydroxymuconate Delta-isomerase; PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: mag:amb2827 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase. (300 aa)    
Predicted Functional Partners:
ACS17443.1
PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: pol:Bpro_3959 5-carboxymethyl-2-hydroxymuconate delta-isomerase.
  
  
 
0.915
ACS17441.1
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: pol:Bpro_3961 short-chain dehydrogenase/reductase SDR.
  
  0.913
ACS17442.1
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: pol:Bpro_3960 short-chain dehydrogenase/reductase SDR.
   
  0.910
ACS17279.1
PFAM: Endoribonuclease L-PSP; KEGG: bur:Bcep18194_B0915 endoribonuclease L-PSP.
  
    0.779
ACS17276.1
PFAM: amidohydrolase 2; KEGG: Acmsd; aminocarboxymuconate semialdehyde decarboxylase; K03392 aminocarboxymuconate-semialdehyde decarboxylase.
  
    0.765
ACS17277.1
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bxe:Bxe_A1113 putative dioxygenase.
     
 0.759
ACS22629.1
PFAM: alpha/beta hydrolase fold; KEGG: rme:Rmet_5996 alpha/beta hydrolase fold.
 
  
 0.696
ACS17281.1
PFAM: Cupin 2 conserved barrel domain protein; KEGG: acr:Acry_1969 anti-ECFsigma factor, ChrR.
  
    0.689
ACS17280.1
PFAM: Malate/L-lactate dehydrogenase; KEGG: met:M446_3591 malate/L-lactate dehydrogenase; Belongs to the LDH2/MDH2 oxidoreductase family.
  
    0.687
ACS17282.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vei:Veis_0620 binding-protein-dependent transport systems inner membrane component.
  
    0.622
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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