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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS17280.1PFAM: Malate/L-lactate dehydrogenase; KEGG: met:M446_3591 malate/L-lactate dehydrogenase; Belongs to the LDH2/MDH2 oxidoreductase family. (350 aa)    
Predicted Functional Partners:
ACS17281.1
PFAM: Cupin 2 conserved barrel domain protein; KEGG: acr:Acry_1969 anti-ECFsigma factor, ChrR.
       0.781
ACS17277.1
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bxe:Bxe_A1113 putative dioxygenase.
 
     0.710
ACS17283.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bph:Bphy_3180 ABC transporter related.
       0.707
ACS17282.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vei:Veis_0620 binding-protein-dependent transport systems inner membrane component.
       0.706
ACS17278.1
5-carboxymethyl-2-hydroxymuconate Delta-isomerase; PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: mag:amb2827 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase.
  
    0.687
ACS17279.1
PFAM: Endoribonuclease L-PSP; KEGG: bur:Bcep18194_B0915 endoribonuclease L-PSP.
       0.682
ACS17276.1
PFAM: amidohydrolase 2; KEGG: Acmsd; aminocarboxymuconate semialdehyde decarboxylase; K03392 aminocarboxymuconate-semialdehyde decarboxylase.
       0.672
ACS17284.1
PFAM: NMT1/THI5 like domain protein; KEGG: oca:OCAR_7362 putative membrane lipoprotein lipid attachment site.
       0.496
ACS17286.1
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: swi:Swit_3324 short-chain dehydrogenase/reductase SDR.
  
  
 0.431
ACS17285.1
PFAM: monooxygenase FAD-binding; KEGG: cti:RALTA_B2288 putative monooxygenase, FAD-binding domain; FAD dependent oxidoreductase.
       0.428
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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