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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS17307.1PFAM: cyclase family protein; KEGG: vei:Veis_1964 cyclase family protein. (259 aa)    
Predicted Functional Partners:
ACS17305.1
KEGG: vei:Veis_1966 putative indolepyruvate oxidoreductase subunit B.
 
     0.911
ACS17306.1
Indolepyruvate ferredoxin oxidoreductase; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: vei:Veis_1965 indolepyruvate ferredoxin oxidoreductase.
 
     0.903
ACS17308.1
PFAM: FAD dependent oxidoreductase; KEGG: vei:Veis_1963 FAD dependent oxidoreductase.
 
   
 0.884
kynU
Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively.
  
  
 0.837
ACS18148.1
PFAM: protein of unknown function DUF35; short-chain dehydrogenase/reductase SDR; KEGG: vei:Veis_2675 hypothetical protein.
 
    0.775
ACS17316.1
KEGG: rso:RSc1828 putative indolepyruvate oxidoreductase subunit B.
 
     0.743
ACS18142.1
KEGG: rso:RSc1828 putative indolepyruvate oxidoreductase subunit B.
 
     0.741
ACS17317.1
Indolepyruvate ferredoxin oxidoreductase; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: rso:RSc1829 putative indolepyruvate ferredoxin alpha subunit oxidoreductase protein.
 
     0.733
ACS18141.1
Indolepyruvate ferredoxin oxidoreductase; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: rso:RSc1829 putative indolepyruvate ferredoxin alpha subunit oxidoreductase protein.
 
     0.732
ACS18145.1
PFAM: aromatic-ring-hydroxylating dioxygenase beta subunit; KEGG: vei:Veis_2678 aromatic-ring-hydroxylating dioxygenase, beta subunit.
 
     0.717
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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