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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS17315.1PFAM: thioesterase superfamily protein; KEGG: rso:RSc1827 putative 4-hydroxybenzoyl-CoA thioesterase protein. (140 aa)    
Predicted Functional Partners:
ACS20530.1
PFAM: thioesterase superfamily protein; KEGG: lch:Lcho_0444 4-hydroxybenzoyl-CoA thioesterase.
  
  
  0.932
ACS17314.1
PFAM: NADH:flavin oxidoreductase/NADH oxidase; monooxygenase FAD-binding; KEGG: rso:RSc1826 salicylyl-CoA 5-hydroxylase.
 
  
 0.927
ubiA
4-hydroxybenzoate polyprenyl transferase; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate.
     
 0.906
ACS18163.1
KEGG: rso:RSc1827 putative 4-hydroxybenzoyl-CoA thioesterase protein.
  
  
 
0.905
ACS17316.1
KEGG: rso:RSc1828 putative indolepyruvate oxidoreductase subunit B.
 
     0.903
ACS19306.1
PFAM: Endoribonuclease L-PSP; KEGG: mpt:Mpe_A1331 hypothetical protein.
    
  0.901
ACS19009.1
KEGG: dac:Daci_4358 4-hydroxybenzoate 3-monooxygenase; TIGRFAM: 4-hydroxybenzoate 3-monooxygenase; PFAM: monooxygenase FAD-binding.
    
  0.900
ACS17317.1
Indolepyruvate ferredoxin oxidoreductase; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: rso:RSc1829 putative indolepyruvate ferredoxin alpha subunit oxidoreductase protein.
 
     0.885
ACS20361.1
PFAM: KR domain protein; Beta-ketoacyl synthase; Acyl transferase; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KEGG: aav:Aave_3732 beta-ketoacyl synthase.
  
 
 0.878
ACS19704.1
TIGRFAM: beta-ribofuranosylaminobenzene 5'-phosphate synthase family; PFAM: GHMP kinase; KEGG: lch:Lcho_3153 beta-ribofuranosylaminobenzene 5'-phosphate synthase.
     
  0.800
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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