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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS17325.1PFAM: major facilitator superfamily MFS_1; KEGG: oan:Oant_4009 major facilitator superfamily MFS_1. (423 aa)    
Predicted Functional Partners:
ACS17326.1
GAF modulated transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; GAF domain protein; SMART: regulatory protein LuxR; KEGG: oan:Oant_4005 response regulator receiver protein.
 
   
 0.606
ACS19775.1
PFAM: major facilitator superfamily MFS_1; KEGG: dac:Daci_0967 major facilitator transporter.
 
  
 0.522
ACS22056.1
PFAM: major facilitator superfamily MFS_1; KEGG: mrd:Mrad2831_5847 major facilitator transporter.
  
     0.487
ACS21749.1
PFAM: major facilitator superfamily MFS_1; KEGG: dac:Daci_2813 major facilitator transporter.
  
     0.453
ACS18136.1
PFAM: NAD/NADP octopine/nopaline dehydrogenase; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; Ketopantoate reductase ApbA/PanE domain protein; KEGG: sil:SPO1466 opine dehydrogenase, putative.
 
   
 0.422
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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