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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS17328.1PFAM: alpha/beta hydrolase fold; PGAP1 family protein; KEGG: xau:Xaut_3216 alpha/beta hydrolase fold. (291 aa)    
Predicted Functional Partners:
ACS18138.1
PFAM: alpha/beta hydrolase fold; KEGG: bpt:Bpet4532 3-oxoadipate enol-lactone hydrolase.
  
     0.576
ACS19391.1
PFAM: alpha/beta hydrolase fold; KEGG: bph:Bphy_6462 alpha/beta hydrolase fold protein.
  
     0.551
ACS22377.1
PFAM: alpha/beta hydrolase fold; KEGG: rpe:RPE_4492 alpha/beta hydrolase fold.
  
     0.536
ACS20544.1
PFAM: alpha/beta hydrolase fold; KEGG: bpa:BPP1032 putative hydrolase.
  
     0.520
ACS17327.1
KEGG: swd:Swoo_0211 phenylacetaldoxime dehydratase.
       0.517
ACS17954.1
PFAM: alpha/beta hydrolase fold; KEGG: pol:Bpro_3711 alpha/beta hydrolase fold.
  
     0.494
ACS22764.1
PFAM: alpha/beta hydrolase fold; KEGG: scl:sce7520 putative hydrolase.
  
     0.463
rutD
Alpha/beta hydrolase fold protein; May increase the rate of spontaneous hydrolysis of aminoacrylate to malonic semialdehyde. Required to remove a toxic intermediate produce in the pyrimidine nitrogen degradation. Belongs to the AB hydrolase superfamily. Hydrolase RutD family.
  
     0.441
ACS22322.1
PFAM: alpha/beta hydrolase fold; KEGG: mlo:mlr2710 hydrolase.
  
     0.441
ACS17780.1
PFAM: alpha/beta hydrolase fold; KEGG: rfr:Rfer_3189 alpha/beta hydrolase.
  
     0.438
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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