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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS17336.1PFAM: Integrase catalytic region; KEGG: pol:Bpro_5344 integrase, catalytic region. (537 aa)    
Predicted Functional Partners:
ACS17335.1
PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: ajs:Ajs_3085 IstB ATP binding domain-containing protein.
 
  
 0.953
ACS22436.1
PFAM: IstB domain protein ATP-binding protein; IstB ATP binding domain protein; KEGG: bxe:Bxe_A1794 putative transposase-related ATP-binding subunit.
 
  
 0.813
ACS17542.1
PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: ajs:Ajs_3085 IstB ATP binding domain-containing protein.
 
  
 0.804
ACS20926.1
PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: ajs:Ajs_3085 IstB ATP binding domain-containing protein.
 
  
 0.804
ACS18749.1
PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: mms:mma_2793 transposase.
 
  
 0.803
ACS19326.1
PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: eba:ebA270 transposition helper protein; Belongs to the DnaA family.
 
  
 0.803
ACS19327.1
Transposase; KEGG: eba:p2A256 transposase.
 
  
 0.709
ACS17337.1
Hypothetical protein.
       0.561
ACS17338.1
KEGG: bte:BTH_I0095 hypothetical protein.
       0.561
ACS18887.1
PFAM: Integrase catalytic region; KEGG: mpt:Mpe_B0526 ISRSO5-transposase protein.
  
     0.492
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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