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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS17344.1PFAM: protein of unknown function DUF427; KEGG: mes:Meso_2621 protein of unknown function DUF427. (127 aa)    
Predicted Functional Partners:
ACS17343.1
PFAM: dienelactone hydrolase; KEGG: mno:Mnod_2323 dienelactone hydrolase.
       0.776
ACS20276.1
TIGRFAM: methyltransferase; KEGG: mpt:Mpe_A1380 hypothetical protein.
 
     0.601
ACS18385.1
PFAM: Substrate-binding region of ABC-type glycine betaine transport system; binding-protein-dependent transport systems inner membrane component; KEGG: rso:RSc2516 putative lipoprotein transmembrane.
 
     0.525
ACS17345.1
PFAM: MscS Mechanosensitive ion channel; KEGG: vei:Veis_0172 MscS mechanosensitive ion channel.
       0.494
ACS20277.1
PFAM: protein of unknown function DUF323; KEGG: bam:Bamb_0015 hypothetical protein.
 
     0.491
ACS17342.1
PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: smd:Smed_5848 activator of HSP90 ATPase 1 family protein.
       0.487
ACS18226.1
PFAM: protein of unknown function DUF323; KEGG: pna:Pnap_1506 hypothetical protein.
 
     0.445
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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