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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS17368.1PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: rfr:Rfer_1428 putative transport protein. (362 aa)    
Predicted Functional Partners:
ACS16776.1
PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: pol:Bpro_0557 hypothetical protein.
 
  
 0.831
ACS18259.1
PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: dia:Dtpsy_1376 tripartite ATP-independent periplasmic transporter DctQ component.
 
  
 0.777
ACS17369.1
KEGG: dar:Daro_1362 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold-4 domain protein; SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein.
       0.773
ACS17370.1
KEGG: gbm:Gbem_0081 diguanylate cyclase with PAS/PAC sensor; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; Cache domain protein; PAS fold domain protein; PAS fold-4 domain protein; histidine kinase HAMP region domain protein; SMART: GGDEF domain containing protein; PAS domain containing protein.
       0.675
ACS17488.1
PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: pna:Pnap_3452 tripartite ATP-independent periplasmic transporter DctQ.
 
  
 0.601
ACS18258.1
TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: dia:Dtpsy_1375 TRAP dicarboxylate transporter, DctM subunit.
 
  
 0.552
ACS17367.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pna:Pnap_2760 LysR family transcriptional regulator.
       0.515
ACS19910.1
PFAM: protein of unknown function DUF1445; KEGG: pol:Bpro_1776 hypothetical protein; Belongs to the D-glutamate cyclase family.
 
     0.467
ACS18594.1
TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: pol:Bpro_0034 TRAP C4-dicarboxylate transport system permease DctM subunit.
  
  
 0.449
ACS19928.1
TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; Tripartite ATP-independent periplasmic transporter DctQ component; Citrate transporter; KEGG: bja:blr2171 ABC transporter permease.
  
  
 0.449
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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