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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS17400.1KEGG: ajs:Ajs_3843 hypothetical protein. (199 aa)    
Predicted Functional Partners:
ACS17399.1
PFAM: protein of unknown function DUF6 transmembrane; KEGG: pol:Bpro_4235 protein of unknown function DUF6, transmembrane.
     
 0.815
ACS17398.1
PFAM: aminotransferase class I and II; KEGG: aav:Aave_4437 GntR family transcriptional regulator.
       0.812
ACS17394.1
TIGRFAM: phenazine biosynthesis protein PhzF family; PFAM: Phenazine biosynthesis PhzC/PhzF protein; KEGG: pna:Pnap_0400 PhzF family phenazine biosynthesis protein.
       0.768
ACS17395.1
PFAM: Glutathione S-transferase domain; KEGG: aav:Aave_4438 glutathione S-transferase domain-containing protein.
     
 0.766
ACS17397.1
PFAM: ThiJ/PfpI domain protein; KEGG: bcm:Bcenmc03_6451 ThiJ/PfpI domain-containing protein.
 
     0.740
ACS17392.1
PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: pol:Bpro_4244 lysine exporter protein (LysE/YggA).
 
     0.713
ACS17396.1
PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: reh:H16_B1958 putative threonine efflux protein.
 
     0.707
ACS17393.1
KEGG: pol:Bpro_4243 hypothetical protein.
       0.701
ACS17391.1
PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: dia:Dtpsy_3120 pyridoxal-5'-phosphate-dependent protein beta subunit.
  
    0.643
ACS17401.1
Transcriptional regulator, GntR family with aminotransferase domain; PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH; KEGG: pol:Bpro_4233 transcriptional regulator, GntR family.
       0.623
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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