Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACS17416.1PFAM: glycosyl transferase group 1; KEGG: bch:Bcen2424_0882 FkbM family methyltransferase. (725 aa)    
Predicted Functional Partners:
ACS17411.1
PFAM: glycosyl transferase group 1; KEGG: bam:Bamb_0758 glycosyl transferase, group 1.
 
     0.702
ACS17417.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: smt:Smal_0491 ABC transporter related.
 
 
 0.622
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.601
glgB-2
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.601
ACS18629.1
KEGG: rfr:Rfer_2157 malto-oligosyltrehalose trehalohydrolase; TIGRFAM: malto-oligosyltrehalose trehalohydrolase; PFAM: alpha amylase catalytic region; glycoside hydrolase family 13 domain protein; SMART: alpha amylase catalytic sub domain.
   
 0.601
ACS17418.1
PFAM: ABC-2 type transporter; KEGG: dno:DNO_0335 ABC-2 type transporter family protein.
 
  
 0.592
ACS17414.1
PFAM: glycosyl transferase group 1; glycosyl transferase family 2; KEGG: dsh:Dshi_3576 glycosyl transferase family protein.
 
  
 0.578
ACS17412.1
TIGRFAM: methyltransferase FkbM family; KEGG: acr:Acry_2942 FkbM family methyltransferase.
 
     0.556
ACS17409.1
PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; dTDP-4-dehydrorhamnose reductase; KEGG: dia:Dtpsy_0560 NAD-dependent epimerase/dehydratase.
 
  
 0.553
ACS17405.1
TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; short-chain dehydrogenase/reductase SDR; dTDP-4-dehydrorhamnose reductase; KEGG: dia:Dtpsy_0553 dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
  
 0.539
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
Server load: low (24%) [HD]