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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS17417.1PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: smt:Smal_0491 ABC transporter related. (233 aa)    
Predicted Functional Partners:
ACS17418.1
PFAM: ABC-2 type transporter; KEGG: dno:DNO_0335 ABC-2 type transporter family protein.
 
 0.999
ACS17420.1
PFAM: glycosyl transferase family 2; KEGG: bcm:Bcenmc03_0849 glycosyl transferase family protein.
 
  
 0.936
ACS17419.1
KEGG: pol:Bpro_3999 mannose-1-phosphate guanylyltransferase (GDP); TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: Nucleotidyl transferase; Cupin 2 conserved barrel domain protein; mannose-6-phosphate isomerase type II.
  
  
 0.909
ACS17427.1
PFAM: glycosyl transferase family 2; Methyltransferase type 11; glycosyl transferase group 1; KEGG: gbe:GbCGDNIH1_0743 glycosyltransferase.
 
 
 0.862
ACS17840.1
PFAM: polysaccharide export protein; KEGG: bam:Bamb_6483 polysaccharide export protein.
  
  
 0.832
ACS18572.1
PFAM: polysaccharide export protein; KEGG: bac:BamMC406_1118 polysaccharide export protein.
  
  
 0.832
ACS19807.1
PFAM: polysaccharide export protein; KEGG: pna:Pnap_3196 polysaccharide export protein.
  
  
 0.832
ACS21006.1
KEGG: rfr:Rfer_1678 ComF family protein.
   
    0.799
ACS17421.1
PFAM: glycosyl transferase family 2; KEGG: sml:Smlt3682 putative glycosyl transferase.
 
  
 0.798
ACS17428.1
PFAM: glycosyl transferase family 2; KEGG: met:M446_0315 glycosyl transferase family protein.
 
  
 0.729
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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