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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS17423.1PFAM: acyltransferase 3; KEGG: sus:Acid_1188 acyltransferase 3. (684 aa)    
Predicted Functional Partners:
ACS17424.1
KEGG: reu:Reut_A0724 glycosyl transferase family protein.
     
 0.589
ACS17425.1
PFAM: glycosyl transferase family 4; KEGG: pol:Bpro_3998 glycosyl transferase, family 4.
  
  
 0.506
ACS21164.1
PFAM: nuclease (SNase domain protein); SMART: nuclease (SNase domain protein); KEGG: mms:mma_1693 micrococcal nuclease-like protein.
  
  
 0.464
ACS20279.1
PFAM: nuclease (SNase domain protein); SMART: nuclease (SNase domain protein); KEGG: dia:Dtpsy_1359 nuclease (SNase domain protein).
  
  
 0.462
ACS20321.1
PFAM: acyltransferase 3; KEGG: bxe:Bxe_B1653 putative exopolysaccharide production protein ExoZ.
  
     0.447
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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