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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS17434.1PFAM: protein of unknown function DUF6 transmembrane; KEGG: rso:RS01739 hypothetical protein. (295 aa)    
Predicted Functional Partners:
ACS17433.1
KEGG: pol:Bpro_1657 putative transmembrane protein.
 
     0.835
ACS17432.1
PFAM: protein of unknown function DUF1326; KEGG: pol:Bpro_1658 protein of unknown function DUF1326.
 
     0.822
ACS17431.1
PFAM: Catalase domain protein; KEGG: bsu:BSU08820 vegetative catalase 1; Belongs to the catalase family.
       0.473
ACS20453.1
KEGG: pna:Pnap_3342 hypothetical protein.
  
     0.405
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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