close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS17438.1PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: vei:Veis_1539 tripartite ATP-independent periplasmic transporter DctQ. (185 aa)    
Predicted Functional Partners:
ACS17439.1
TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: vei:Veis_1540 TRAP dicarboxylate transporter, DctP subunit.
 
  
 0.958
ACS17437.1
TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: vei:Veis_1538 TRAP dicarboxylate transporter, DctM subunit.
 
 
 0.925
ACS17436.1
PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein; SAF domain protein; KEGG: pol:Bpro_3967 altronate dehydratase.
 
     0.750
ACS17435.1
PFAM: Malate/L-lactate dehydrogenase; KEGG: vei:Veis_1530 hypothetical protein; Belongs to the LDH2/MDH2 oxidoreductase family.
  
    0.713
ACS17440.1
PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: vei:Veis_1542 GntR domain-containing protein.
       0.637
ACS18372.1
TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: aav:Aave_2594 TRAP dicarboxylate transporter, DctM subunit.
 
 
 0.593
ACS18374.1
TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: aav:Aave_2592 TRAP dicarboxylate transporter, DctP subunit.
 
  
 0.584
ACS18258.1
TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: dia:Dtpsy_1375 TRAP dicarboxylate transporter, DctM subunit.
 
 
 0.580
ACS19914.1
PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: pol:Bpro_1870 tripartite ATP-independent periplasmic transporter, DctQ component.
  
   
 0.579
ACS19913.1
TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: ajs:Ajs_1941 TRAP dicarboxylate transporter, DctP subunit.
 
  
 0.578
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.