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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS17442.1PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: pol:Bpro_3960 short-chain dehydrogenase/reductase SDR. (248 aa)    
Predicted Functional Partners:
ACS17441.1
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: pol:Bpro_3961 short-chain dehydrogenase/reductase SDR.
 
  
 
0.982
ACS17443.1
PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: pol:Bpro_3959 5-carboxymethyl-2-hydroxymuconate delta-isomerase.
  
  0.971
ACS17278.1
5-carboxymethyl-2-hydroxymuconate Delta-isomerase; PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: mag:amb2827 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase.
   
  0.910
ACS17959.1
PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: mes:Meso_3046 mandelate racemase/muconate lactonizing enzyme-like.
    
  0.900
ACS17440.1
PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: vei:Veis_1542 GntR domain-containing protein.
  
  
 0.534
ACS20194.1
PFAM: sulfatase; KEGG: vei:Veis_2294 sulfatase.
   
 
 0.480
ACS21970.1
KEGG: dac:Daci_1762 (acyl-carrier protein) S-malonyltransferase.
 
 
 0.461
ACS17445.1
PFAM: Extracellular ligand-binding receptor; KEGG: vei:Veis_1904 extracellular ligand-binding receptor.
   
   0.455
ACS17436.1
PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein; SAF domain protein; KEGG: pol:Bpro_3967 altronate dehydratase.
 
   
 0.453
ACS17439.1
TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: vei:Veis_1540 TRAP dicarboxylate transporter, DctP subunit.
       0.442
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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