Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ACS17445.1PFAM: Extracellular ligand-binding receptor; KEGG: vei:Veis_1904 extracellular ligand-binding receptor. (400 aa)    
Predicted Functional Partners:
ACS17447.1
PFAM: inner-membrane translocator; KEGG: vei:Veis_1906 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.918
ACS17446.1
PFAM: inner-membrane translocator; KEGG: vei:Veis_1905 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
    0.890
ACS17448.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: vei:Veis_1907 ABC transporter related.
 
  
 0.880
ACS17444.1
Transcriptional regulator, GntR family; PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: vei:Veis_1903 UbiC transcription regulator-associated domain-containing protein.
 
     0.862
ACS17458.1
PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; KEGG: vei:Veis_1915 fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein.
 
  
 0.819
ACS17449.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: vei:Veis_1908 ABC transporter related.
 
    0.737
ACS17455.1
5-oxoprolinase (ATP-hydrolyzing); PFAM: Hydantoinase B/oxoprolinase; KEGG: vei:Veis_1912 5-oxoprolinase (ATP-hydrolyzing).
 
     0.715
ACS17457.1
PFAM: isochorismatase hydrolase; KEGG: vei:Veis_1914 isochorismatase hydrolase.
 
     0.703
ACS16846.1
PFAM: inner-membrane translocator; KEGG: pol:Bpro_4063 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.670
ACS18157.1
PFAM: ABC transporter related; inner-membrane translocator; SMART: AAA ATPase; KEGG: vei:Veis_2874 ABC transporter related; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.669
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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