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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS17450.1PFAM: conserved hypothetical protein; KEGG: vei:Veis_1909 hypothetical protein. (318 aa)    
Predicted Functional Partners:
ACS17453.1
KEGG: met:M446_1932 MmgE/PrpD family protein.
  
    0.777
ACS17451.1
TIGRFAM: homoaconitate hydratase family protein; PFAM: aconitate hydratase domain protein; KEGG: vei:Veis_1910 3-isopropylmalate dehydratase large subunit.
       0.773
ACS17452.1
TIGRFAM: 3-isopropylmalate dehydratase, small subunit; PFAM: aconitate hydratase domain protein; KEGG: vei:Veis_1911 3-isopropylmalate dehydratase, small subunit; Belongs to the LeuD family.
       0.773
ACS17902.1
PFAM: protein of unknown function DUF112 transmembrane; KEGG: ajs:Ajs_3411 hypothetical protein.
 
    0.712
ACS22938.1
PFAM: protein of unknown function DUF112 transmembrane; KEGG: vei:Veis_4018 hypothetical protein.
 
    0.710
ACS16980.1
PFAM: protein of unknown function DUF112 transmembrane; KEGG: pna:Pnap_3237 hypothetical protein.
 
    0.708
ACS17454.1
PFAM: conserved hypothetical protein; KEGG: reu:Reut_B3664 hypothetical protein.
 
    
0.696
ACS17459.1
KEGG: vei:Veis_1916 isocitrate lyase family protein.
       0.682
ACS17458.1
PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; KEGG: vei:Veis_1915 fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein.
  
    0.681
ACS17455.1
5-oxoprolinase (ATP-hydrolyzing); PFAM: Hydantoinase B/oxoprolinase; KEGG: vei:Veis_1912 5-oxoprolinase (ATP-hydrolyzing).
       0.678
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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