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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS17462.1PFAM: regulatory protein TetR; KEGG: pol:Bpro_3958 transcriptional regulator, TetR family. (233 aa)    
Predicted Functional Partners:
ACS21874.1
PFAM: Barstar (barnase inhibitor); KEGG: dia:Dtpsy_3467 barstar (barnase inhibitor).
  
     0.646
ACS17463.1
PFAM: acyl-CoA dehydrogenase domain protein; KEGG: dia:Dtpsy_0571 acyl-CoA dehydrogenase domain protein.
       0.643
ACS17465.1
PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: ajs:Ajs_0594 3-hydroxyacyl-CoA dehydrogenase.
 
  
 0.600
ACS17464.1
KEGG: aav:Aave_4088 hypothetical protein.
 
     0.598
ACS21390.1
KEGG: dia:Dtpsy_0437 hypothetical protein.
  
     0.565
ACS21369.1
PFAM: GCN5-related N-acetyltransferase; KEGG: pol:Bpro_4211 GCN5-related N-acetyltransferase.
  
   
 0.556
ACS18111.1
Putative RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: scl:sce6417 ECF subfamily RNA polymerase sigma factor.
  
     0.491
ACS17461.1
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; Male sterility domain; KEGG: spe:Spro_3865 short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
     
 0.490
ACS21389.1
KEGG: pol:Bpro_0444 hypothetical protein.
  
   
 0.447
ACS20703.1
KEGG: pol:Bpro_0907 hypothetical protein.
  
     0.444
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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