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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS17486.1TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: pna:Pnap_3454 TRAP dicarboxylate transporter, DctP subunit. (345 aa)    
Predicted Functional Partners:
ACS17487.1
TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: pna:Pnap_3453 TRAP dicarboxylate transporter, DctM subunit.
  
 0.909
ACS17488.1
PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: pna:Pnap_3452 tripartite ATP-independent periplasmic transporter DctQ.
 
  
 0.902
ACS19915.1
TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; Citrate transporter; KEGG: dia:Dtpsy_1742 TRAP dicarboxylate transporter, DctM subunit.
  
 0.823
ACS19945.1
TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; C4-dicarboxylate anaerobic carrier; KEGG: lch:Lcho_0415 TRAP dicarboxylate transporter, DctM subunit.
  
 0.814
ACS21934.1
TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: atc:AGR_C_4974 hypothetical protein.
  
 0.806
ACS17437.1
TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: vei:Veis_1538 TRAP dicarboxylate transporter, DctM subunit.
  
 0.791
ACS18372.1
TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: aav:Aave_2594 TRAP dicarboxylate transporter, DctM subunit.
  
 0.790
ACS16775.1
TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: pol:Bpro_0558 TRAP dicarboxylate transporter-DctM subunit.
  
 0.789
ACS18258.1
TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: dia:Dtpsy_1375 TRAP dicarboxylate transporter, DctM subunit.
  
 0.772
ACS19928.1
TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; Tripartite ATP-independent periplasmic transporter DctQ component; Citrate transporter; KEGG: bja:blr2171 ABC transporter permease.
  
 0.767
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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