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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS17488.1PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: pna:Pnap_3452 tripartite ATP-independent periplasmic transporter DctQ. (194 aa)    
Predicted Functional Partners:
ACS17487.1
TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: pna:Pnap_3453 TRAP dicarboxylate transporter, DctM subunit.
 
 
 0.974
ACS17486.1
TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: pna:Pnap_3454 TRAP dicarboxylate transporter, DctP subunit.
 
  
 0.902
ACS16777.1
PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: pol:Bpro_0556 TRAP dicarboxylate transporter-DctP subunit.
 
  
 0.717
ACS17368.1
PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: rfr:Rfer_1428 putative transport protein.
 
  
 0.601
ACS18258.1
TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: dia:Dtpsy_1375 TRAP dicarboxylate transporter, DctM subunit.
 
 
 0.535
ACS18260.1
PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: dia:Dtpsy_1377 TRAP dicarboxylate transporter-DctP subunit.
 
  
 0.526
ACS17489.1
PFAM: conserved hypothetical protein; KEGG: dac:Daci_1399 hypothetical protein.
       0.508
ACS16775.1
TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: pol:Bpro_0558 TRAP dicarboxylate transporter-DctM subunit.
 
 
 0.485
ACS19915.1
TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; Citrate transporter; KEGG: dia:Dtpsy_1742 TRAP dicarboxylate transporter, DctM subunit.
 
 
 0.479
ACS19913.1
TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: ajs:Ajs_1941 TRAP dicarboxylate transporter, DctP subunit.
 
  
 0.461
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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