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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS17506.1PFAM: extracellular solute-binding protein family 5; KEGG: vei:Veis_2065 extracellular solute-binding protein. (552 aa)    
Predicted Functional Partners:
ACS17505.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pol:Bpro_0381 binding-protein-dependent transport systems inner membrane component.
 
 
 0.967
ACS17504.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vei:Veis_2063 binding-protein-dependent transport systems inner membrane component.
 
 
 0.965
ACS17503.1
KEGG: pol:Bpro_0383 oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
 
 0.850
ACS17502.1
KEGG: pol:Bpro_0384 oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
  
 0.774
ACS18206.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: reh:H16_B1127 ABC-type transporter, permease component: PepT family.
 
 
 0.596
ACS17740.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pol:Bpro_2112 binding-protein-dependent transport systems inner membrane component.
 
 
 0.579
ACS17743.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pol:Bpro_2114 binding-protein-dependent transport systems inner membrane component.
 
 
 0.579
ACS21836.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pol:Bpro_0425 binding-protein-dependent transport systems inner membrane component.
 
 
 0.572
ACS18205.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rme:Rmet_5090 binding-protein-dependent transport systems inner membrane component.
 
 
 0.547
pyrC
Dihydroorotase, homodimeric type; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate.
       0.546
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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