close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS17521.1PFAM: protein of unknown function DUF1656; KEGG: bav:BAV2023 component of multidrug efflux system. (68 aa)    
Predicted Functional Partners:
ACS17520.1
PFAM: Fusaric acid resistance protein conserved region; KEGG: bbr:BB3081 hypothetical protein.
 
   
 0.949
ACS17522.1
PFAM: secretion protein HlyD family protein; KEGG: bbr:BB3083 HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
     0.891
ACS17519.1
Transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: bpe:BP2664 MarR family transcriptional regulator.
 
     0.873
ACS17523.1
TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: bav:BAV2025 outer membrane multidrug efflux protein.
 
   
 0.815
ACS20928.1
PFAM: Fusaric acid resistance protein conserved region; KEGG: bbr:BB3081 hypothetical protein.
 
   
 0.777
ACS17524.1
TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bpt:Bpet2972 MFS family transporter.
       0.757
ACS17149.1
KEGG: psp:PSPPH_2654 putative lipoprotein.
  
     0.598
ACS19874.1
PFAM: protein of unknown function DUF1311; KEGG: ajs:Ajs_2008 hypothetical protein.
  
     0.564
ACS20930.1
PFAM: secretion protein HlyD family protein; KEGG: bpt:Bpet2608 HlyD family secretion protein.
 
     0.506
ACS16669.1
KEGG: bbr:BB3068 hypothetical protein.
  
     0.475
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.