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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS17528.1PFAM: conserved hypothetical protein; KEGG: aav:Aave_4503 hypothetical protein. (347 aa)    
Predicted Functional Partners:
ACS17901.1
PFAM: protein of unknown function DUF1468; KEGG: dia:Dtpsy_2746 protein of unknown function DUF1468.
 
    0.617
ACS16981.1
PFAM: protein of unknown function DUF1468; KEGG: aav:Aave_1069 hypothetical protein.
 
    0.577
ACS22937.1
PFAM: protein of unknown function DUF1468; KEGG: aav:Aave_1069 hypothetical protein.
 
    0.562
ACS17526.1
PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; KEGG: pol:Bpro_1128 RNA-binding S4.
       0.546
ACS17527.1
PFAM: beta-lactamase domain protein; NUDIX hydrolase; KEGG: vei:Veis_1888 beta-lactamase domain-containing protein.
       0.546
ACS17525.1
Hypothetical protein; KEGG: GE23771 gene product from transcript GE23771-RA.
       0.427
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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