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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS17587.1TIGRFAM: TonB family protein; KEGG: pol:Bpro_1088 TonB-like. (283 aa)    
Predicted Functional Partners:
ACS19267.1
PFAM: Biopolymer transport protein ExbD/TolR; KEGG: aav:Aave_2565 biopolymer transport protein ExbD/TolR.
 
 
 0.889
ACS19268.1
PFAM: MotA/TolQ/ExbB proton channel; KEGG: rfr:Rfer_3153 MotA/TolQ/ExbB proton channel.
 
 
 0.878
mtgA
Monofunctional biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family.
       0.817
ACS17588.1
PFAM: ribonuclease II; KEGG: ajs:Ajs_3654 ribonuclease II.
 
    0.816
ACS19173.1
PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: pna:Pnap_2368 TonB-dependent receptor, plug.
 
 
 
 0.793
ACS17073.1
PFAM: Biopolymer transport protein ExbD/TolR; KEGG: pna:Pnap_3787 biopolymer transport protein ExbD/TolR.
  
 
 0.766
ACS18455.1
PFAM: Biopolymer transport protein ExbD/TolR; KEGG: aav:Aave_3313 biopolymer transport protein ExbD/TolR.
  
 
 0.766
ACS19735.1
PFAM: Biopolymer transport protein ExbD/TolR; KEGG: lch:Lcho_2942 biopolymer transport protein ExbD/TolR.
  
 
 0.766
aroE
Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).
  
  
 0.762
ACS20353.1
PFAM: ferric iron reductase; KEGG: aav:Aave_3725 ferric iron reductase protein FhuF.
  
  
 0.756
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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