close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS17685.1PFAM: GCN5-related N-acetyltransferase; KEGG: pol:Bpro_2086 GCN5-related N-acetyltransferase. (183 aa)    
Predicted Functional Partners:
ACS17684.1
Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: pol:Bpro_2085 transcriptional regulator, XRE family.
 
   
 0.881
ACS17683.1
Hypothetical protein.
       0.623
ACS17682.1
PFAM: protein of unknown function DUF1504; KEGG: mpt:Mpe_A0367 hypothetical protein.
     
 0.516
ACS21563.1
Transcriptional regulator, ArsR family; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: sus:Acid_4574 ArsR family transcriptional regulator.
 
  
 0.505
ACS21687.1
PFAM: peptidase M22 glycoprotease; KEGG: ajs:Ajs_3940 peptidase M22, glycoprotease.
  
 
 0.449
ACS21857.1
PFAM: Antibiotic biosynthesis monooxygenase; KEGG: met:M446_1296 antibiotic biosynthesis monooxygenase.
 
     0.419
guaA
GMP synthase, large subunit; Catalyzes the synthesis of GMP from XMP.
     
 0.412
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.