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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS17686.1PFAM: protein of unknown function DUF6 transmembrane; KEGG: bsu:BSU26620 hypothetical protein. (327 aa)    
Predicted Functional Partners:
ACS17687.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: gur:Gura_1198 LysR family transcriptional regulator.
  
    0.570
ACS17688.1
PFAM: Mur ligase middle domain protein; KEGG: pde:Pden_2407 Mur ligase, middle domain protein.
 
    0.476
ACS17556.1
PFAM: protein of unknown function DUF945; KEGG: dac:Daci_4282 hypothetical protein.
  
   
 0.407
ACS18517.1
PFAM: protein of unknown function DUF6 transmembrane; KEGG: rfr:Rfer_1956 hypothetical protein.
  
     0.406
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.