close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS17692.1PFAM: short-chain dehydrogenase/reductase SDR; KEGG: aav:Aave_2258 short-chain dehydrogenase/reductase SDR. (258 aa)    
Predicted Functional Partners:
ACS17691.1
PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: aav:Aave_2259 gluconolactonase.
 
 0.961
ACS16883.1
PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: pna:Pnap_0122 SMP-30/gluconolaconase/LRE domain-containing protein.
 
 0.920
ACS18375.1
PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: pna:Pnap_1592 SMP-30/gluconolaconase/LRE domain-containing protein.
 
 0.915
ACS22596.1
Transcriptional regulator, IclR family; PFAM: SMP-30/Gluconolaconase/LRE domain protein; Transcriptional regulator IclR; regulatory protein IclR; SMART: regulatory protein IclR; KEGG: smd:Smed_3586 SMP-30/gluconolaconase/LRE domain protein.
 
 0.913
ACS21675.1
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rfr:Rfer_0433 short-chain dehydrogenase/reductase SDR.
  
  
 
0.904
ACS18166.1
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rme:Rmet_4813 short-chain dehydrogenase/reductase SDR.
 
    0.692
ACS22088.1
PFAM: short-chain dehydrogenase/reductase SDR; NAD-dependent epimerase/dehydratase; KEGG: ccs:CCNA_01892 short chain dehydrogenase.
  
     0.664
ACS22599.1
2-dehydro-3-deoxygalactonokinase; PFAM: 2-keto-3-deoxy-galactonokinase; KEGG: bvi:Bcep1808_0593 2-keto-3-deoxygalactonate kinase.
  
     0.534
ACS20306.1
2-dehydro-3-deoxygalactonokinase; PFAM: 2-keto-3-deoxy-galactonokinase; KEGG: pol:Bpro_3534 2-keto-3-deoxygalactonate kinase.
  
     0.521
ACS22768.1
PFAM: short-chain dehydrogenase/reductase SDR; NAD-dependent epimerase/dehydratase; KEGG: pol:Bpro_0106 short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
 
 0.504
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.