STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS17695.1PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: aav:Aave_2255 periplasmic binding protein/LacI transcriptional regulator. (321 aa)    
Predicted Functional Partners:
ACS17699.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aav:Aave_2251 ABC transporter-related protein.
 
 0.983
ACS17700.1
PFAM: inner-membrane translocator; KEGG: aav:Aave_2250 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 0.981
ACS17701.1
PFAM: inner-membrane translocator; KEGG: aav:Aave_2249 inner membrane ABC transporter permease protein YjfF; Belongs to the binding-protein-dependent transport system permease family.
 0.981
ACS17697.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: lch:Lcho_3199 ABC transporter-related protein.
 
 
 0.893
ACS17698.1
PFAM: inner-membrane translocator; KEGG: lch:Lcho_3198 monosaccharide-transporting ATPase; Belongs to the binding-protein-dependent transport system permease family.
  
 0.873
ACS18308.1
Histidine kinase; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; KEGG: bph:Bphy_5975 histidine kinase.
  
 
 0.863
ACS17696.1
KEGG: aav:Aave_2254 sugar ABC transporter, periplasmic sugar-binding protein.
 
  
 0.851
rbsD
RbsD or FucU transport; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose.
 
  
 0.827
ACS22172.1
KEGG: acr:Acry_0578 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; GAF domain protein; response regulator receiver; PAS fold-4 domain protein; PAS fold domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; GAF domain protein; response regulator receiver; histidine kinase A domain protein; PAS domain containing protein.
   
 
 0.800
ACS21469.1
PFAM: inner-membrane translocator; KEGG: vei:Veis_3273 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 0.796
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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