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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS17704.1Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: dia:Dtpsy_0176 transcriptional regulator, LysR family. (350 aa)    
Predicted Functional Partners:
ACS17705.1
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: dia:Dtpsy_0177 short-chain dehydrogenase/reductase SDR.
 
     0.664
ACS22388.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: vei:Veis_2901 LysR family transcriptional regulator.
  
     0.541
ACS22637.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: sme:SMa0498 transcriptional regulator, LysR family.
  
     0.528
ACS18324.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: aav:Aave_3122 LysR family transcriptional regulator.
  
     0.521
ACS22050.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: azc:AZC_1928 transcriptional regulator.
  
     0.487
ACS22745.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bbr:BB1112 LysR family transcriptional regulator.
  
     0.486
ACS18601.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: aav:Aave_2084 LysR family transcriptional regulator.
  
     0.476
ACS22921.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rso:RSp0942 nitrogen assimilation transcriptional regulator.
  
     0.463
ACS18332.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: vei:Veis_2521 LysR family transcriptional regulator.
  
     0.459
ACS20887.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: dac:Daci_3769 LysR family transcriptional regulator.
  
     0.448
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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