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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS17730.1TIGRFAM: general secretion pathway protein I; PFAM: type II secretion system protein I/J; KEGG: pol:Bpro_1323 general secretion pathway protein I. (124 aa)    
Predicted Functional Partners:
ACS17728.1
KEGG: pol:Bpro_1325 general secretion pathway protein K.
 
 
 0.996
ACS17729.1
KEGG: ajs:Ajs_0672 hypothetical protein.
 
 
 0.992
ACS17732.1
TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G; KEGG: aav:Aave_0925 general secretion pathway protein G.
 
  
 0.967
ACS17724.1
TIGRFAM: general secretion pathway protein D; PFAM: type II and III secretion system protein; NolW domain protein; KEGG: ajs:Ajs_0667 general secretion pathway protein D.
 
  
 0.934
ACS17725.1
KEGG: dia:Dtpsy_0647 putative general secretory pathway N transmembrane protein.
 
   
 0.928
ACS17727.1
PFAM: General secretion pathway L; KEGG: pol:Bpro_1326 hypothetical protein.
 
  
 0.921
ACS17722.1
TIGRFAM: general secretion pathway protein F; PFAM: type II secretion system protein; KEGG: dia:Dtpsy_0642 general secretion pathway protein F.
 
  
 0.906
ACS17723.1
KEGG: dia:Dtpsy_0645 general secretory pathway protein E; TIGRFAM: general secretory pathway protein E; PFAM: type II secretion system protein E; SMART: AAA ATPase.
 
 
 0.869
ACS17731.1
TIGRFAM: general secretion pathway protein H; KEGG: aav:Aave_0924 general secretion pathway protein H.
  
  
 0.817
ACS20834.1
PFAM: type II secretion system protein; KEGG: ajs:Ajs_0804 type II secretion system protein.
  
  
 0.765
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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