close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS17746.1PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B; KEGG: mpt:Mpe_B0122 hypothetical protein. (310 aa)    
Predicted Functional Partners:
ACS16680.1
PFAM: Pirin domain protein; KEGG: rso:RSc0541 pirin-like protein; Belongs to the pirin family.
 
  
 0.632
ACS19739.1
PFAM: Pirin domain protein; KEGG: pol:Bpro_2897 pirin-like; Belongs to the pirin family.
 
  
 0.601
ACS21839.1
PFAM: Pirin domain protein; KEGG: psp:PSPPH_2192 pirin; Belongs to the pirin family.
 
  
 0.600
ACS17744.1
KEGG: pol:Bpro_2115 oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
       0.598
ACS17745.1
KEGG: pol:Bpro_2116 oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
       0.598
ACS21852.1
PFAM: Pirin domain protein; KEGG: pol:Bpro_4775 pirin-like; Belongs to the pirin family.
 
  
 0.592
ACS17743.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pol:Bpro_2114 binding-protein-dependent transport systems inner membrane component.
       0.540
ACS22068.1
PFAM: Pirin domain protein; Cupin 2 conserved barrel domain protein; KEGG: aav:Aave_0758 pirin domain-containing protein; Belongs to the pirin family.
 
  
 0.528
ACS19742.1
PFAM: Pirin domain protein; KEGG: dia:Dtpsy_1785 pirin domain protein; Belongs to the pirin family.
 
  
 0.519
ACS16904.1
PFAM: 5-carboxymethyl-2-hydroxymuconate isomerase; KEGG: dac:Daci_0102 5-carboxymethyl-2-hydroxymuconate isomerase.
  
  
 0.499
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.