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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS17748.1PFAM: extracellular solute-binding protein family 1; KEGG: bms:BRA0720 ABC transporter, periplasmic substrate-binding protein. (337 aa)    
Predicted Functional Partners:
ACS17749.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rde:RD1_1060 iron ABC transporter, permease protein, putative.
 
 
 0.996
ACS17750.1
PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rde:RD1_1061 Fe-ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 0.982
ACS20316.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_A4317 ABC spermidine/putrescine transporter, inner membrane subunit.
 
 
 0.943
ACS20315.1
PFAM: extracellular solute-binding protein family 1; KEGG: bmj:BMULJ_01151 iron(III) transport system substrate-binding protein.
  
  
 0.918
ACS21581.1
PFAM: extracellular solute-binding protein family 1; KEGG: smd:Smed_3752 extracellular solute-binding protein family 1.
  
  
 
0.904
ACS20317.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bmj:BMULJ_01149 iron(III) transport system ATP-binding protein.
 
 
 0.876
ACS17751.1
TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: rfr:Rfer_1128 HAD family hydrolase.
 
     0.818
ACS18013.1
PFAM: histidine kinase internal region; KEGG: dia:Dtpsy_2665 histidine kinase internal region.
   
   0.617
ACS17865.1
PFAM: extracellular solute-binding protein family 5; KEGG: vei:Veis_3323 extracellular solute-binding protein.
  
   
 0.549
zwf
Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.
       0.534
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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