close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS17757.1PFAM: conserved hypothetical protein; KEGG: cti:RALTA_B0222 hypothetical protein. (326 aa)    
Predicted Functional Partners:
ACS22589.1
PFAM: protein of unknown function DUF112 transmembrane; KEGG: aav:Aave_3272 hypothetical protein.
    0.805
ACS16980.1
PFAM: protein of unknown function DUF112 transmembrane; KEGG: pna:Pnap_3237 hypothetical protein.
    0.801
ACS17902.1
PFAM: protein of unknown function DUF112 transmembrane; KEGG: ajs:Ajs_3411 hypothetical protein.
    0.801
ACS22938.1
PFAM: protein of unknown function DUF112 transmembrane; KEGG: vei:Veis_4018 hypothetical protein.
    0.800
ACS18858.1
PFAM: protein of unknown function DUF112 transmembrane; KEGG: pol:Bpro_3009 protein of unknown function DUF112, transmembrane.
    0.771
ACS19628.1
PFAM: protein of unknown function DUF112 transmembrane; KEGG: pol:Bpro_2011 protein of unknown function DUF112, transmembrane.
    0.756
ACS22746.1
PFAM: protein of unknown function DUF112 transmembrane; KEGG: oca:OCAR_5203 integral membrane protein.
    0.739
ACS21102.1
PFAM: protein of unknown function DUF112 transmembrane; KEGG: pol:Bpro_2797 protein of unknown function DUF112, transmembrane.
    0.732
ACS17756.1
4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: Pyridoxal phosphate biosynthetic protein PdxA; KEGG: pap:PSPA7_3077 4-hydroxythreonine-4-phosphate dehydrogenase; Belongs to the PdxA family.
       0.665
ACS17758.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pol:Bpro_3514 transcriptional regulator, LysR family.
       0.544
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.