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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS17773.1TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: har:HEAR1368 putative ferrisiderophore receptor. (701 aa)    
Predicted Functional Partners:
ACS17774.1
PFAM: PepSY-associated TM helix domain protein; KEGG: dac:Daci_1877 PepSY-associated TM helix domain-containing protein.
 
  
 0.828
ACS17776.1
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: bbr:BB0832 TonB-dependent receptor.
 
  
 0.726
ACS20358.1
TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; Thioesterase; phosphopantetheine-binding; condensation domain protein; KEGG: aav:Aave_3729 amino acid adenylation domain-containing protein.
 
  
 0.707
ACS17775.1
KEGG: dac:Daci_1876 hypothetical protein.
       0.697
ACS20333.1
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: aav:Aave_2807 TonB-dependent receptor.
 
  
 0.633
ACS17771.1
TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: aav:Aave_0192 TonB-dependent siderophore receptor.
 
  
0.623
ACS20349.1
RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; KEGG: dac:Daci_4750 ECF subfamily RNA polymerase sigma-24 factor.
 
  
 0.541
ACS17772.1
PFAM: phospholipase D/Transphosphatidylase; SMART: phospholipase D/Transphosphatidylase; KEGG: reh:H16_B2471 cardiolipin synthetase.
  
    0.512
ACS18459.1
PFAM: 2OG-Fe(II) oxygenase; SMART: Prolyl 4-hydroxylase alpha subunit; KEGG: lch:Lcho_1570 2OG-Fe(II) oxygenase.
 
  
 0.495
ACS20353.1
PFAM: ferric iron reductase; KEGG: aav:Aave_3725 ferric iron reductase protein FhuF.
 
  
 0.457
Your Current Organism:
Variovorax paradoxus S110
NCBI taxonomy Id: 543728
Other names: V. paradoxus S110, Variovorax paradoxus str. S110, Variovorax paradoxus strain S110
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